SlideIO 2.0.0
Open-source library for reading of medical images
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pketiledscene.hpp
1// This file is part of slideio project.
2// It is subject to the license terms in the LICENSE file found in the top-level directory
3// of this distribution and at http://slideio.com/license.html.
4#pragma once
5
6#include "slideio/drivers/pke/pkescene.hpp"
7#include "slideio/imagetools/tifftools.hpp"
8#include "slideio/core/tools/tilecomposer.hpp"
9
10#if defined(_MSC_VER)
11#pragma warning( push )
12#pragma warning(disable: 4251)
13#endif
14
15namespace slideio
16{
17 class SLIDEIO_PKE_EXPORTS PKETiledScene : public PKEScene, public Tiler
18 {
19 public:
20 PKETiledScene(const std::string& filePath,
21 int sceneIndex,
22 const std::string& driverId,
23 const std::string& name,
24 const std::vector<slideio::TiffDirectory>& dirs);
25 PKETiledScene(const std::string& filePath,
26 int sceneIndex,
27 const std::string& driverId,
28 libtiff::TIFF* hFile,
29 const std::string& name,
30 const std::vector<slideio::TiffDirectory>& dirs);
31 int getNumChannels() const override;
32 cv::Rect getRect() const override;
33 void readResampledBlockChannelsEx(const cv::Rect& blockRect, const cv::Size& blockSize,
34 const std::vector<int>& componentIndices, int zSliceIndex, int tFrameIndex, cv::OutputArray output) override;
35 int findZoomLevel(double zoom) const;
36 // Tiler methods
37 int getTileCount(void* userData) override;
38 bool getTileRect(int tileIndex, cv::Rect& tileRect, void* userData) override;
39 bool readTile(int tileIndex, const std::vector<int>& channelIndices, cv::OutputArray tileRaster,
40 void* userData) override;
41 void initializeBlock(const cv::Size& blockSize, const std::vector<int>& channelIndices, cv::OutputArray output) override;
42 std::string getChannelName(int channel) const override;
43 bool isBrightField() const;
44 private:
45 void initialize();
46 void initializeChannelNames();
47 bool readTiffTile(int tileIndex, int zoomLevel, const std::vector<int>& channelIndices, cv::OutputArray tileRaster);
48 bool readTiffDirectory(const TiffDirectory& dir, const std::vector<int>& channelIndices, cv::OutputArray tileRaster);
49 private:
50 std::vector<slideio::TiffDirectory> m_directories;
51 bool m_isUnmixed = false;
52 std::vector<int> m_zoomDirectoryIndices;
53 int m_numChannels = 0;
54 std::vector<std::string> m_channelNames;
55 };
56}
57
58#if defined(_MSC_VER)
59#pragma warning( pop )
60#endif
Definition: exceptions.hpp:15